Index

A

add_column() (biogeme.database.Database method), [1] add_parameter() (biogeme.parameters.Parameters method) addColumn() (biogeme.database.Database method), [1] AIC_BIC_dimension() (in module biogeme.multiobjectives) aic_bic_dimension() (in module biogeme.multiobjectives) algorithm_has_converged() (biogeme.results.bioResults method) all_alpha_fixed() (biogeme.nests.OneNestForCrossNestedLogit method) all_alphas_fixed() (biogeme.nests.NestsForCrossNestedLogit method) all_configurations() (biogeme.controller.Controller method) all_parameters_tuple() (in module biogeme.default_parameters) all_results (biogeme.specification.Specification attribute) alternatives (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute)

And (class in biogeme.expressions.binary_expressions), [1] argument_warning() (biogeme.biogeme.BIOGEME static method), [1] AssistedSpecification (class in biogeme.assisted) audit() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.comparison_expressions.ComparisonOperator method), [1] (biogeme.expressions.elementary_expressions.Variable method), [1] (biogeme.expressions.idmanager.IdManager method), [1] (biogeme.expressions.logit_expressions.LogLogit method), [1] (biogeme.expressions.unary_expressions.BelongsTo method), [1] (biogeme.expressions.unary_expressions.Integrate method), [1] (biogeme.expressions.unary_expressions.MonteCarlo method), [1] (biogeme.expressions.unary_expressions.PanelLikelihoodTrajectory method), [1]

B

BelongsTo (class in biogeme.expressions.unary_expressions), [1] bestIteration (biogeme.biogeme.BIOGEME attribute), [1] BETA (biogeme.expressions.elementary_types.TypeOfElementaryExpression attribute), [1] beta (biogeme.expressions.nary_expressions.LinearTermTuple attribute), [1] Beta (class in biogeme.expressions.beta_parameters), [1] (class in biogeme.results) beta_code() (biogeme.segmentation.OneSegmentation method) (biogeme.segmentation.Segmentation method) beta_expression() (biogeme.segmentation.OneSegmentation method) beta_name() (biogeme.segmentation.OneSegmentation method) beta_values_dict_to_list() (biogeme.biogeme.BIOGEME method), [1] betaNames (biogeme.results.RawResults attribute) betas (biogeme.expressions.nary_expressions.bioLinearUtility attribute), [1] (biogeme.results.RawResults attribute) betaValues (biogeme.results.RawResults attribute) bfgs_linesearch_for_biogeme() (in module biogeme.optimization) bfgs_trust_region_for_biogeme() (in module biogeme.optimization) bhhh (biogeme.function_output.BiogemeFunctionOutput attribute) (biogeme.results.RawResults attribute) bhhhs (biogeme.function_output.BiogemeDisaggregateFunctionOutput attribute) BinaryOperator (class in biogeme.expressions.binary_expressions), [1] bio_bfgs() (in module biogeme.optimization) bio_newton() (in module biogeme.optimization) bioDraws (class in biogeme.expressions.elementary_expressions), [1] BIOGEME (class in biogeme.biogeme), [1] biogeme.assisted module biogeme.biogeme module, [1] biogeme.biogeme_logging module biogeme.catalog module biogeme.check_parameters module biogeme.cnl module biogeme.configuration module biogeme.controller module biogeme.data.mdcev_data module biogeme.data.optima module biogeme.data.swissmetro module biogeme.database module, [1] biogeme.default_parameters module biogeme.deprecated module biogeme.dict_of_formulas module biogeme.distributions module biogeme.draws module biogeme.exceptions module biogeme.expressions.base_expressions module, [1] biogeme.expressions.beta_parameters module, [1] biogeme.expressions.binary_expressions module, [1] biogeme.expressions.calculator module, [1] biogeme.expressions.catalog_iterator module, [1] biogeme.expressions.comparison_expressions module, [1] biogeme.expressions.convert module, [1] biogeme.expressions.elementary_expressions module, [1] biogeme.expressions.elementary_types module, [1] biogeme.expressions.idmanager module, [1] biogeme.expressions.logit_expressions module, [1] biogeme.expressions.multiple_expressions module, [1] biogeme.expressions.named_expression module, [1] biogeme.expressions.nary_expressions module, [1] biogeme.expressions.numeric_expressions module, [1] biogeme.expressions.numeric_tools module biogeme.expressions.unary_expressions module, [1] biogeme.filenames module biogeme.function_output module biogeme.loglikelihood module biogeme.lsh module

biogeme.mdcev.gamma_profile module biogeme.mdcev.generalized module biogeme.mdcev.mdcev module biogeme.mdcev.non_monotonic module biogeme.mdcev.translated module biogeme.messaging module biogeme.models.boxcox module biogeme.models.cnl module biogeme.models.logit module biogeme.models.mev module biogeme.models.models_orig module biogeme.models.nested module biogeme.models.ordered module biogeme.models.piecewise module biogeme.multiobjectives module biogeme.native_draws module biogeme.negative_likelihood module biogeme.nests module biogeme.optimization module biogeme.parameters module biogeme.partition module biogeme.results module biogeme.sampling_of_alternatives.choice_set_generation module biogeme.sampling_of_alternatives.generate_model module biogeme.sampling_of_alternatives.sampling_context module biogeme.sampling_of_alternatives.sampling_of_alternatives module biogeme.segmentation module biogeme.singleton module biogeme.specification module biogeme.tools.checks module biogeme.tools.database module biogeme.tools.derivatives module biogeme.tools.files module biogeme.tools.likelihood_ratio module biogeme.tools.primes module biogeme.tools.time module biogeme.tools.unique_ids module biogeme.validity module biogeme.version module biogeme_file_name (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) biogeme_parameters (biogeme.biogeme.BIOGEME attribute) (biogeme.specification.Specification attribute) BiogemeDisaggregateFunctionOutput (class in biogeme.function_output) BiogemeDisaggregateFunctionOutputSmartOutputProxy (class in biogeme.function_output) BiogemeError BiogemeFunctionOutput (class in biogeme.function_output) BiogemeFunctionOutputSmartOutputProxy (class in biogeme.function_output) bioLinearUtility (class in biogeme.expressions.nary_expressions), [1] bioMax (class in biogeme.expressions.binary_expressions), [1] bioMessage (class in biogeme.messaging) bioMin (class in biogeme.expressions.binary_expressions), [1] bioMultSum (class in biogeme.expressions.nary_expressions), [1] bioNormalCdf (class in biogeme.expressions.unary_expressions), [1] bioResults (class in biogeme.results) bootstrap (biogeme.results.RawResults attribute) bootstrap_pValue (biogeme.results.Beta attribute) bootstrap_results (biogeme.biogeme.BIOGEME attribute), [1] bootstrap_samples (biogeme.biogeme.BIOGEME property), [1] bootstrap_time (biogeme.biogeme.BIOGEME attribute), [1] (biogeme.results.RawResults attribute) bootstrap_tTest (biogeme.results.Beta attribute) boxcox() (in module biogeme.models.boxcox) (in module biogeme.models.models_orig) build_panel_map() (biogeme.database.Database method), [1] buildPanelMap() (biogeme.database.Database method), [1]

C

calc_p_value() (in module biogeme.results) calcPValue() (in module biogeme.results) calculate_baseline_utility() (biogeme.mdcev.mdcev.Mdcev method) calculate_function_and_derivatives() (in module biogeme.expressions.calculator), [1] calculate_init_likelihood() (biogeme.biogeme.BIOGEME method), [1] calculate_inverse_of_determinant_entries() (biogeme.mdcev.mdcev.Mdcev method) calculate_inverse_of_determinant_one_alternative() (biogeme.mdcev.gamma_profile.GammaProfile method) (biogeme.mdcev.generalized.Generalized method) (biogeme.mdcev.mdcev.Mdcev method) (biogeme.mdcev.non_monotonic.NonMonotonic method) (biogeme.mdcev.translated.Translated method) calculate_likelihood() (biogeme.biogeme.BIOGEME method), [1] calculate_likelihood_and_derivatives() (biogeme.biogeme.BIOGEME method), [1] calculate_log_determinant_entries() (biogeme.mdcev.mdcev.Mdcev method) calculate_log_determinant_one_alternative() (biogeme.mdcev.gamma_profile.GammaProfile method) (biogeme.mdcev.generalized.Generalized method) (biogeme.mdcev.mdcev.Mdcev method) (biogeme.mdcev.non_monotonic.NonMonotonic method) (biogeme.mdcev.translated.Translated method) calculate_mu_utility() (biogeme.mdcev.non_monotonic.NonMonotonic method) calculate_null_loglikelihood() (biogeme.biogeme.BIOGEME method), [1] calculate_prime_numbers() (in module biogeme.tools.primes) calculate_utilities() (biogeme.mdcev.mdcev.Mdcev method) calculateInitLikelihood() (biogeme.biogeme.BIOGEME method), [1] calculateLikelihood() (biogeme.biogeme.BIOGEME method), [1] calculateLikelihoodAndDerivatives() (biogeme.biogeme.BIOGEME method), [1] calculateNullLoglikelihood() (biogeme.biogeme.BIOGEME method), [1] Catalog (class in biogeme.catalog) catalog_name (biogeme.expressions.multiple_expressions.CatalogItem attribute), [1] catalog_size() (biogeme.catalog.Catalog method) (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] CatalogItem (class in biogeme.expressions.multiple_expressions), [1] central_controller (biogeme.expressions.base_expressions.Expression attribute), [1] CentralController (class in biogeme.controller) change_init_values() (biogeme.biogeme.BIOGEME method), [1] (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.beta_parameters.Beta method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] check (biogeme.default_parameters.ParameterTuple attribute) check_algo_name() (in module biogeme.check_parameters) check_availability_of_chosen_alt() (biogeme.database.Database method), [1] check_consistency_of_named_dicts() (in module biogeme.tools.checks) check_derivatives() (biogeme.biogeme.BIOGEME method), [1] (in module biogeme.tools.derivatives) check_draws() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.elementary_expressions.bioDraws method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] (biogeme.expressions.unary_expressions.MonteCarlo method), [1] check_expression() (biogeme.sampling_of_alternatives.sampling_context.SamplingContext method) check_intersection() (biogeme.nests.NestsForNestedLogit method) check_mev_partition() (biogeme.sampling_of_alternatives.sampling_context.SamplingContext method) check_names() (biogeme.nests.Nests method) check_panel_trajectory() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.elementary_expressions.Variable method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] (biogeme.expressions.unary_expressions.PanelLikelihoodTrajectory method), [1] check_parameter_value() (biogeme.parameters.Parameters static method) check_partition() (biogeme.nests.NestsForNestedLogit method) (biogeme.sampling_of_alternatives.sampling_context.SamplingContext method) check_rv() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.elementary_expressions.RandomVariable method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] (biogeme.expressions.unary_expressions.Integrate method), [1] check_segmentation() (biogeme.database.Database method), [1]

check_union() (biogeme.nests.Nests method) check_valid_alternatives() (biogeme.sampling_of_alternatives.sampling_context.SamplingContext method) check_validity() (biogeme.nests.NestsForCrossNestedLogit method) (in module biogeme.dict_of_formulas) checkAvailabilityOfChosenAlt() (biogeme.database.Database method), [1] checkDerivatives() (biogeme.biogeme.BIOGEME method), [1] (in module biogeme.tools.derivatives) children (biogeme.expressions.base_expressions.Expression attribute), [1] choice (biogeme.expressions.logit_expressions.LogLogit attribute), [1] choice_availability_statistics() (biogeme.database.Database method), [1] choice_column (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) choiceAvailabilityStatistics() (biogeme.database.Database method), [1] ChoiceSetsGeneration (class in biogeme.sampling_of_alternatives.choice_set_generation) cnl() (in module biogeme.models.cnl) (in module biogeme.models.models_orig) cnl_avail() (in module biogeme.models.cnl) (in module biogeme.models.models_orig) cnl_CDF() (in module biogeme.cnl) cnl_cdf() (in module biogeme.cnl) cnl_G() (in module biogeme.cnl) cnl_g() (in module biogeme.cnl) cnl_nests (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) cnlmu() (in module biogeme.models.cnl) (in module biogeme.models.models_orig) combined_variables (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) ComparisonOperator (class in biogeme.expressions.comparison_expressions), [1] compile_estimation_results() (in module biogeme.results) compile_results_in_directory() (in module biogeme.results) compileEstimationResults() (in module biogeme.results) condition (biogeme.expressions.nary_expressions.ConditionalTermTuple attribute), [1] ConditionalSum (class in biogeme.expressions.nary_expressions), [1] ConditionalTermTuple (class in biogeme.expressions.nary_expressions), [1] confidence_intervals() (biogeme.biogeme.BIOGEME method), [1] confidenceIntervals() (biogeme.biogeme.BIOGEME method), [1] config_id (biogeme.specification.Specification property) Configuration (class in biogeme.configuration) configure_catalogs() (biogeme.expressions.base_expressions.Expression method), [1] configure_expression() (biogeme.specification.Specification method) contains_catalog() (biogeme.expressions.base_expressions.Expression method), [1] controller (biogeme.configuration.SelectionTuple attribute) Controller (class in biogeme.controller) controller_size() (biogeme.controller.Controller method) convergence (biogeme.biogeme.BIOGEME attribute), [1] (biogeme.results.RawResults attribute) convert_random_generator_tuple() (in module biogeme.native_draws) convert_to_dict() (in module biogeme.function_output) correlation() (biogeme.nests.NestsForCrossNestedLogit method) (biogeme.nests.NestsForNestedLogit method) cos (class in biogeme.expressions.unary_expressions), [1] count() (biogeme.database.Database method), [1] count_number_of_groups() (in module biogeme.tools.database) count_panel_trajectory_expressions() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] (biogeme.expressions.unary_expressions.PanelLikelihoodTrajectory method), [1] countNumberOfGroups() (in module biogeme.tools.database) countPanelTrajectoryExpressions() (biogeme.expressions.base_expressions.Expression method), [1] covariance() (biogeme.nests.NestsForCrossNestedLogit method) create_backup() (in module biogeme.tools.files) create_function() (biogeme.expressions.base_expressions.Expression method), [1] create_objective_function() (biogeme.expressions.base_expressions.Expression method), [1] createFunction() (biogeme.expressions.base_expressions.Expression method), [1] CrossVariableTuple (class in biogeme.sampling_of_alternatives.sampling_context) current_configuration() (biogeme.expressions.base_expressions.Expression method), [1] current_name() (biogeme.controller.Controller method)

D

data (biogeme.database.Database attribute), [1] (biogeme.results.bioResults attribute) database (biogeme.specification.Specification attribute) Database (class in biogeme.database), [1] dataname (biogeme.results.RawResults attribute) decreased_controller() (biogeme.controller.CentralController method) default_specification() (biogeme.specification.Specification class method) define_new_variables() (biogeme.sampling_of_alternatives.choice_set_generation.ChoiceSetsGeneration method) define_variable() (biogeme.database.Database method), [1] DefineVariable (class in biogeme.expressions.elementary_expressions), [1] DefineVariable() (biogeme.database.Database method), [1] deprecated() (in module biogeme.deprecated) deprecated_parameters() (in module biogeme.deprecated) derivative_utility_one_alternative() (biogeme.mdcev.gamma_profile.GammaProfile method) (biogeme.mdcev.generalized.Generalized method) (biogeme.mdcev.mdcev.Mdcev method) (biogeme.mdcev.non_monotonic.NonMonotonic method) (biogeme.mdcev.translated.Translated method) Derive (class in biogeme.expressions.unary_expressions), [1] describe() (biogeme.specification.Specification method) description (biogeme.default_parameters.ParameterTuple attribute) (biogeme.native_draws.RandomNumberGeneratorTuple attribute) description_of_native_draws() (in module biogeme.native_draws)

descriptionOfNativeDraws() (biogeme.database.Database method), [1] dict_of_alpha (biogeme.nests.OneNestForCrossNestedLogit attribute) dict_of_catalogs() (biogeme.expressions.base_expressions.Expression method), [1] dict_of_draw_types() (biogeme.expressions.base_expressions.Expression method), [1] dict_of_elementary_expression() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.beta_parameters.Beta method), [1] (biogeme.expressions.elementary_expressions.bioDraws method), [1] (biogeme.expressions.elementary_expressions.RandomVariable method), [1] (biogeme.expressions.elementary_expressions.Variable method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] (biogeme.expressions.nary_expressions.bioLinearUtility method), [1] dict_of_expressions (biogeme.expressions.nary_expressions.Elem attribute), [1] dimension() (biogeme.negative_likelihood.NegativeLikelihood method) DiscreteSegmentationTuple (class in biogeme.segmentation) Divide (class in biogeme.expressions.binary_expressions), [1] dogleg (biogeme.biogeme.BIOGEME property), [1] draw_types() (biogeme.expressions.idmanager.IdManager method), [1] DRAWS (biogeme.expressions.elementary_types.TypeOfElementaryExpression attribute), [1] drawsProcessingTime (biogeme.biogeme.BIOGEME attribute), [1] (biogeme.results.RawResults attribute) dump_file() (biogeme.parameters.Parameters method) dump_on_file() (biogeme.database.Database method), [1] dumpOnFile() (biogeme.database.Database method), [1] DuplicateError

E

Elem (class in biogeme.expressions.nary_expressions), [1] Elementary (class in biogeme.expressions.elementary_expressions), [1] elementaryIndex (biogeme.expressions.elementary_expressions.Elementary attribute), [1] ElementsTuple (class in biogeme.expressions.idmanager), [1] embed_expression() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] embedExpression() (biogeme.expressions.base_expressions.Expression method), [1] enlarging_factor (biogeme.biogeme.BIOGEME property), [1] Equal (class in biogeme.expressions.comparison_expressions), [1] estimate() (biogeme.biogeme.BIOGEME method), [1] estimate_catalog() (biogeme.biogeme.BIOGEME method), [1] estimate_parameters() (biogeme.mdcev.mdcev.Mdcev method)

estimation (biogeme.database.EstimationValidation attribute), [1] estimation_results (biogeme.mdcev.mdcev.Mdcev property) EstimationValidation (class in biogeme.database), [1] excludedData (biogeme.database.Database attribute), [1] (biogeme.results.RawResults attribute) exp (class in biogeme.expressions.unary_expressions), [1] expression (biogeme.expressions.multiple_expressions.NamedExpression attribute), [1] (biogeme.specification.Specification attribute) Expression (class in biogeme.expressions.base_expressions), [1] expression_to_value() (in module biogeme.expressions.convert), [1] expressions (biogeme.expressions.idmanager.ElementsTuple attribute), [1] expressions_names_indices() (in module biogeme.expressions.idmanager), [1] extract_rows() (biogeme.database.Database method), [1]

F

F12FileName (biogeme.results.RawResults attribute) FileNotFound files_of_type() (biogeme.biogeme.BIOGEME method), [1] findiff_g() (in module biogeme.tools.derivatives) findiff_H() (in module biogeme.tools.derivatives) findiff_h() (in module biogeme.tools.derivatives) fix_betas() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.beta_parameters.Beta method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] FIXED_BETA (biogeme.expressions.elementary_types.TypeOfElementaryExpression attribute), [1] fixedBetaValues (biogeme.expressions.base_expressions.Expression attribute), [1] flatten_database() (in module biogeme.tools.database) forecast() (biogeme.mdcev.mdcev.Mdcev method) forecast_bisection_one_draw() (biogeme.mdcev.mdcev.Mdcev method) forecast_bruteforce_one_draw() (biogeme.mdcev.mdcev.Mdcev method) forecast_comparison_one_draw() (biogeme.mdcev.mdcev.Mdcev method) format (biogeme.results.GeneralStatistic attribute) format_comment() (in module biogeme.parameters) format_timedelta() (in module biogeme.tools.time)

formula (biogeme.sampling_of_alternatives.sampling_context.CrossVariableTuple attribute) formulas (biogeme.biogeme.BIOGEME attribute), [1] FREE_BETA (biogeme.expressions.elementary_types.TypeOfElementaryExpression attribute), [1] free_beta_names (biogeme.biogeme.BIOGEME property), [1] freeBetaNames (biogeme.biogeme.BIOGEME property), [1] from_configuration() (biogeme.biogeme.BIOGEME class method), [1] from_dict() (biogeme.catalog.Catalog class method) (biogeme.configuration.Configuration class method) from_string() (biogeme.configuration.Configuration class method) from_string_id() (biogeme.specification.Specification class method) from_tuple() (biogeme.native_draws.RandomNumberGeneratorTuple class method) (biogeme.nests.OneNestForCrossNestedLogit class method) (biogeme.nests.OneNestForNestedLogit class method) from_tuple_of_configurations() (biogeme.configuration.Configuration class method) fullData (biogeme.database.Database attribute), [1] fullIndividualMap (biogeme.database.Database attribute), [1] function (biogeme.function_output.FunctionOutput attribute) FunctionOutput (class in biogeme.function_output) functions (biogeme.function_output.BiogemeDisaggregateFunctionOutput attribute)

G

g (biogeme.results.RawResults attribute) gamma_is_none (biogeme.mdcev.mdcev.MdcevConfiguration attribute) GammaProfile (class in biogeme.mdcev.gamma_profile) Generalized (class in biogeme.mdcev.generalized) GeneralStatistic (class in biogeme.results) generate_document() (biogeme.parameters.Parameters method) generate_draws() (biogeme.database.Database method), [1] generate_epsilons() (biogeme.mdcev.mdcev.Mdcev method) generate_flat_panel_dataframe() (biogeme.database.Database method), [1] generate_html (biogeme.biogeme.BIOGEME property), [1] generate_operator() (biogeme.assisted.AssistedSpecification method) generate_pickle (biogeme.biogeme.BIOGEME property), [1] generate_segment_size() (in module biogeme.sampling_of_alternatives.sampling_of_alternatives) generate_segmentation() (biogeme.database.Database method), [1] generate_unique_ids() (in module biogeme.tools.unique_ids) generate_utility() (biogeme.sampling_of_alternatives.generate_model.GenerateModel method) generateDraws() (biogeme.database.Database method), [1] generateFlatPanelDataframe() (biogeme.database.Database method), [1] GenerateModel (class in biogeme.sampling_of_alternatives.generate_model) generatePickle (biogeme.biogeme.BIOGEME property), [1] generator (biogeme.native_draws.RandomNumberGeneratorTuple attribute) generic_alt_specific_catalogs() (in module biogeme.catalog) generic_name (biogeme.specification.Specification attribute) get_all_controllers() (biogeme.catalog.Catalog method) (biogeme.expressions.base_expressions.Expression method), [1] get_alpha_dict() (biogeme.nests.NestsForCrossNestedLogit method) get_alpha_values() (biogeme.nests.NestsForCrossNestedLogit method) get_antithetic() (in module biogeme.draws) get_attributes_from_expression() (biogeme.sampling_of_alternatives.choice_set_generation.ChoiceSetsGeneration method) get_beta() (biogeme.catalog.SegmentedParameters method) get_beta_values() (biogeme.biogeme.BIOGEME method), [1] (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.results.bioResults method) get_betas_for_sensitivity_analysis() (biogeme.results.bioResults method) get_bootstrap_var_covar() (biogeme.results.bioResults method) get_bounds_on_beta() (biogeme.biogeme.BIOGEME method), [1] get_children() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] get_class_name() (biogeme.expressions.base_expressions.Expression method), [1] get_configuration() (biogeme.controller.CentralController method) get_correlation_results() (biogeme.results.bioResults method) get_cross_nested_logit() (biogeme.sampling_of_alternatives.generate_model.GenerateModel method) get_default_value() (in module biogeme.parameters) get_dict_expressions() (in module biogeme.expressions.convert), [1] get_dict_values() (in module biogeme.expressions.convert), [1] get_element() (biogeme.specification.Specification method) get_elementary_expression() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.elementary_expressions.Elementary method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] get_estimated_parameters() (biogeme.results.bioResults method) get_expression() (in module biogeme.dict_of_formulas) get_f12() (biogeme.results.bioResults method) get_file_logger() (in module biogeme.biogeme_logging) get_general_statistics() (biogeme.results.bioResults method) get_halton_draws() (in module biogeme.draws) get_html() (biogeme.configuration.Configuration method) (biogeme.results.bioResults method) (in module biogeme.version) get_id() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] get_index() (biogeme.catalog.SegmentedParameters method) get_iterator() (biogeme.catalog.Catalog method) (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] get_latex() (biogeme.results.bioResults method) (in module biogeme.version) get_latin_hypercube_draws() (in module biogeme.draws) get_logit() (biogeme.sampling_of_alternatives.generate_model.GenerateModel method) get_lsh_weights() (in module biogeme.lsh) get_mev_for_cross_nested() (in module biogeme.models.cnl) get_mev_for_cross_nested_mu() (in module biogeme.models.cnl) get_mev_for_nested() (in module biogeme.models.nested) get_mev_for_nested_mu() (in module biogeme.models.nested) get_mev_generating_for_nested() (in module biogeme.models.nested) get_nest() (in module biogeme.nests) get_nested_logit() (biogeme.sampling_of_alternatives.generate_model.GenerateModel method) get_new_file_name() (in module biogeme.filenames) get_normal_wichura_draws() (in module biogeme.draws) get_number_of_observations() (biogeme.database.Database method), [1] get_operator_decreased_controllers() (biogeme.controller.CentralController method) get_operator_increased_controllers() (biogeme.controller.CentralController method) get_operator_modify_random_controllers() (biogeme.controller.CentralController method) get_operator_two_controllers() (biogeme.controller.CentralController method) get_param_tuple() (biogeme.parameters.Parameters method) get_prime_numbers() (in module biogeme.tools.primes) get_results() (biogeme.specification.Specification method) get_robust_var_covar() (biogeme.results.bioResults method) get_sample_size() (biogeme.database.Database method), [1] get_screen_logger() (in module biogeme.biogeme_logging) get_selection() (biogeme.configuration.Configuration method) get_signature() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.beta_parameters.Beta method), [1] (biogeme.expressions.elementary_expressions.bioDraws method), [1] (biogeme.expressions.elementary_expressions.RandomVariable method), [1] (biogeme.expressions.elementary_expressions.Variable method), [1] (biogeme.expressions.logit_expressions.LogLogit method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] (biogeme.expressions.nary_expressions.bioLinearUtility method), [1] (biogeme.expressions.nary_expressions.ConditionalSum method), [1] (biogeme.expressions.nary_expressions.Elem method), [1] (biogeme.expressions.numeric_expressions.Numeric method), [1] (biogeme.expressions.unary_expressions.BelongsTo method), [1] (biogeme.expressions.unary_expressions.Derive method), [1] (biogeme.expressions.unary_expressions.Integrate method), [1] (biogeme.expressions.unary_expressions.PowerConstant method), [1] get_status_id_manager() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.elementary_expressions.Elementary method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] get_string_id() (biogeme.configuration.Configuration method) get_text() (in module biogeme.version)

get_uniform() (in module biogeme.draws) get_value() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.beta_parameters.Beta method), [1] (biogeme.expressions.binary_expressions.And method), [1] (biogeme.expressions.binary_expressions.bioMax method), [1] (biogeme.expressions.binary_expressions.bioMin method), [1] (biogeme.expressions.binary_expressions.Divide method), [1] (biogeme.expressions.binary_expressions.Minus method), [1] (biogeme.expressions.binary_expressions.Or method), [1] (biogeme.expressions.binary_expressions.Plus method), [1] (biogeme.expressions.binary_expressions.Power method), [1] (biogeme.expressions.binary_expressions.Times method), [1] (biogeme.expressions.comparison_expressions.Equal method), [1] (biogeme.expressions.comparison_expressions.Greater method), [1] (biogeme.expressions.comparison_expressions.GreaterOrEqual method), [1] (biogeme.expressions.comparison_expressions.Less method), [1] (biogeme.expressions.comparison_expressions.LessOrEqual method), [1] (biogeme.expressions.comparison_expressions.NotEqual method), [1] (biogeme.expressions.logit_expressions.LogLogit method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] (biogeme.expressions.nary_expressions.bioMultSum method), [1] (biogeme.expressions.nary_expressions.ConditionalSum method), [1] (biogeme.expressions.nary_expressions.Elem method), [1] (biogeme.expressions.numeric_expressions.Numeric method), [1] (biogeme.expressions.unary_expressions.cos method), [1] (biogeme.expressions.unary_expressions.exp method), [1] (biogeme.expressions.unary_expressions.log method), [1] (biogeme.expressions.unary_expressions.logzero method), [1] (biogeme.expressions.unary_expressions.PowerConstant method), [1] (biogeme.expressions.unary_expressions.sin method), [1] (biogeme.expressions.unary_expressions.UnaryMinus method), [1] (biogeme.parameters.Parameters method) get_value_and_derivatives() (biogeme.expressions.base_expressions.Expression method), [1] get_value_c() (biogeme.expressions.base_expressions.Expression method), [1] get_var_covar() (biogeme.results.bioResults method) get_version() (in module biogeme.version) getAntithetic() (in module biogeme.draws) getBetasForSensitivityAnalysis() (biogeme.results.bioResults method) getBetaValues() (biogeme.results.bioResults method) getBootstrapVarCovar() (biogeme.results.bioResults method) getBoundsOnBeta() (biogeme.biogeme.BIOGEME method), [1] getClassName() (biogeme.expressions.base_expressions.Expression method), [1] getCorrelationResults() (biogeme.results.bioResults method) getElementaryExpression() (biogeme.expressions.base_expressions.Expression method), [1] getEstimatedParameters() (biogeme.results.bioResults method) getF12() (biogeme.results.bioResults method) getGeneralStatistics() (biogeme.results.bioResults method) getHaltonDraws() (in module biogeme.draws) getHtml() (biogeme.results.bioResults method) (in module biogeme.version) getLaTeX() (biogeme.results.bioResults method) (in module biogeme.version) getLatinHypercubeDraws() (in module biogeme.draws) getMevForCrossNested() (in module biogeme.models.cnl) (in module biogeme.models.models_orig) getMevForCrossNestedMu() (in module biogeme.models.cnl) (in module biogeme.models.models_orig) getMevForNested() (in module biogeme.models.models_orig) (in module biogeme.models.nested) getMevForNestedMu() (in module biogeme.models.models_orig) (in module biogeme.models.nested) getMevGeneratingForNested() (in module biogeme.models.models_orig) (in module biogeme.models.nested) getNormalWichuraDraws() (in module biogeme.draws) getNumberOfObservations() (biogeme.database.Database method), [1] getRobustVarCovar() (biogeme.results.bioResults method) getSampleSize() (biogeme.database.Database method), [1] getSignature() (biogeme.expressions.base_expressions.Expression method), [1] getStatusIdManager() (biogeme.expressions.base_expressions.Expression method), [1] getText() (in module biogeme.version) getUniform() (in module biogeme.draws) getValue() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.beta_parameters.Beta method), [1] (biogeme.expressions.binary_expressions.And method), [1] (biogeme.expressions.binary_expressions.bioMax method), [1] (biogeme.expressions.binary_expressions.bioMin method), [1] (biogeme.expressions.binary_expressions.Divide method), [1] (biogeme.expressions.binary_expressions.Minus method), [1] (biogeme.expressions.binary_expressions.Or method), [1] (biogeme.expressions.binary_expressions.Plus method), [1] (biogeme.expressions.binary_expressions.Power method), [1] (biogeme.expressions.binary_expressions.Times method), [1] (biogeme.expressions.comparison_expressions.Equal method), [1] (biogeme.expressions.comparison_expressions.Greater method), [1] (biogeme.expressions.comparison_expressions.GreaterOrEqual method), [1] (biogeme.expressions.comparison_expressions.Less method), [1] (biogeme.expressions.comparison_expressions.LessOrEqual method), [1] (biogeme.expressions.comparison_expressions.NotEqual method), [1] (biogeme.expressions.logit_expressions.LogLogit method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] (biogeme.expressions.nary_expressions.bioMultSum method), [1] (biogeme.expressions.nary_expressions.ConditionalSum method), [1] (biogeme.expressions.nary_expressions.Elem method), [1] (biogeme.expressions.numeric_expressions.Numeric method), [1] (biogeme.expressions.unary_expressions.cos method), [1] (biogeme.expressions.unary_expressions.exp method), [1] (biogeme.expressions.unary_expressions.log method), [1] (biogeme.expressions.unary_expressions.logzero method), [1] (biogeme.expressions.unary_expressions.sin method), [1] (biogeme.expressions.unary_expressions.UnaryMinus method), [1] getValue_c() (biogeme.expressions.base_expressions.Expression method), [1] getValueAndDerivatives() (biogeme.expressions.base_expressions.Expression method), [1] getVarCovar() (biogeme.results.bioResults method) getVersion() (in module biogeme.version) gradient (biogeme.function_output.FunctionOutput attribute) gradientNorm (biogeme.results.RawResults attribute) gradients (biogeme.function_output.BiogemeDisaggregateFunctionOutput attribute) Greater (class in biogeme.expressions.comparison_expressions), [1] GreaterOrEqual (class in biogeme.expressions.comparison_expressions), [1]

H

H (biogeme.results.RawResults attribute) halton2() (in module biogeme.native_draws) halton3() (in module biogeme.native_draws)

halton5() (in module biogeme.native_draws) hessian (biogeme.function_output.FunctionOutput attribute) hessians (biogeme.function_output.BiogemeDisaggregateFunctionOutput attribute) htmlFileName (biogeme.results.RawResults attribute)

I

id_column (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) id_manager (biogeme.expressions.base_expressions.Expression attribute), [1] identification_chosen_alternatives() (biogeme.mdcev.mdcev.Mdcev method) identification_threshold (biogeme.biogeme.BIOGEME property), [1] IdManager (class in biogeme.expressions.idmanager), [1] import_document() (biogeme.parameters.Parameters method) include_cnl_alphas() (biogeme.sampling_of_alternatives.sampling_context.SamplingContext method) increased_controller() (biogeme.controller.CentralController method) indices (biogeme.expressions.idmanager.ElementsTuple attribute), [1] individualMap (biogeme.database.Database attribute), [1] individuals (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) infeasible_cg (biogeme.biogeme.BIOGEME property), [1] info_gamma_parameters() (biogeme.mdcev.mdcev.Mdcev method) initial_radius (biogeme.biogeme.BIOGEME property), [1] initialize_properties() (biogeme.biogeme.BIOGEME class method), [1] initLogLike (biogeme.biogeme.BIOGEME attribute), [1] (biogeme.results.RawResults attribute) Integrate (class in biogeme.expressions.unary_expressions), [1]

intersection() (biogeme.nests.OneNestForNestedLogit method) is_boolean() (in module biogeme.check_parameters) is_bound_active() (biogeme.results.Beta method) is_integer() (in module biogeme.check_parameters) is_model_complex() (biogeme.biogeme.BIOGEME method), [1] is_next_alternative_chosen() (biogeme.mdcev.mdcev.Mdcev method) is_non_negative() (in module biogeme.check_parameters) is_number() (in module biogeme.check_parameters) is_numeric() (in module biogeme.expressions.numeric_tools) is_panel() (biogeme.database.Database method), [1] is_positive() (in module biogeme.check_parameters) is_similar_to() (in module biogeme.dict_of_formulas) is_valid() (biogeme.assisted.AssistedSpecification method) is_valid_filename() (in module biogeme.tools.files) isPanel() (biogeme.database.Database method), [1] issue_deprecation_warning() (in module biogeme.deprecated) item_index (biogeme.expressions.multiple_expressions.CatalogItem attribute), [1] item_name (biogeme.expressions.multiple_expressions.CatalogItem attribute), [1]

K

keep_id_manager (biogeme.expressions.base_expressions.Expression attribute), [1]

L

large_data_set (biogeme.biogeme.BIOGEME property), [1] largest_neighborhood (biogeme.biogeme.BIOGEME property), [1] lastSample (biogeme.biogeme.BIOGEME attribute), [1] latexFileName (biogeme.results.RawResults attribute) lb (biogeme.results.Beta attribute) Less (class in biogeme.expressions.comparison_expressions), [1] LessOrEqual (class in biogeme.expressions.comparison_expressions), [1] like_derivatives (biogeme.negative_likelihood.NegativeLikelihood attribute) likelihood_finite_difference_hessian() (biogeme.biogeme.BIOGEME method), [1] likelihood_ratio_test() (biogeme.results.bioResults method) (in module biogeme.tools.likelihood_ratio) likelihoodFiniteDifferenceHessian() (biogeme.biogeme.BIOGEME method), [1] likelihoodregression() (in module biogeme.loglikelihood) LinearTermTuple (class in biogeme.expressions.nary_expressions), [1] list_of_alternatives (biogeme.nests.OneNestForNestedLogit attribute) list_of_code() (biogeme.segmentation.OneSegmentation method) list_of_expressions() (biogeme.segmentation.OneSegmentation method) listOfTerms (biogeme.expressions.nary_expressions.bioLinearUtility attribute), [1] log (class in biogeme.expressions.unary_expressions), [1] log_like (biogeme.biogeme.BIOGEME attribute), [1] log_like_name (biogeme.biogeme.BIOGEME attribute), [1] log_like_valid_names (biogeme.biogeme.BIOGEME attribute) log_statistics() (biogeme.assisted.ParetoPostProcessing method) logcnl() (in module biogeme.models.cnl) (in module biogeme.models.models_orig) logcnl_avail() (in module biogeme.models.cnl) (in module biogeme.models.models_orig) logcnlmu() (in module biogeme.models.cnl) (in module biogeme.models.models_orig) logger (in module biogeme.database), [1] logisticcdf() (in module biogeme.distributions)

logit() (in module biogeme.models.logit) (in module biogeme.models.models_orig) loglike (biogeme.biogeme.BIOGEME property), [1] logLike (biogeme.results.RawResults attribute) loglikelihood() (biogeme.mdcev.mdcev.Mdcev method) (in module biogeme.loglikelihood) loglikelihood_dimension() (in module biogeme.multiobjectives) loglikelihoodregression() (in module biogeme.loglikelihood) loglikeSignatures (biogeme.biogeme.BIOGEME attribute), [1] LogLogit (class in biogeme.expressions.logit_expressions), [1] loglogit() (in module biogeme.models.logit) (in module biogeme.models.models_orig) loglogit_sampling() (in module biogeme.models.models_orig) logmev() (in module biogeme.models.mev) (in module biogeme.models.models_orig) logmev_endogenous_sampling() (in module biogeme.models.mev) logmev_endogenousSampling() (in module biogeme.models.mev) (in module biogeme.models.models_orig) lognested() (in module biogeme.models.models_orig) (in module biogeme.models.nested) lognested_mev_mu() (in module biogeme.models.nested) lognestedMevMu() (in module biogeme.models.models_orig) (in module biogeme.models.nested) lognormalpdf() (in module biogeme.distributions) logzero (class in biogeme.expressions.unary_expressions), [1] lower_bound_dual_variable() (biogeme.mdcev.gamma_profile.GammaProfile method) (biogeme.mdcev.generalized.Generalized method) (biogeme.mdcev.mdcev.Mdcev method) (biogeme.mdcev.non_monotonic.NonMonotonic method) (biogeme.mdcev.translated.Translated method) LRTuple (class in biogeme.tools.likelihood_ratio)

M

make_getter() (biogeme.biogeme.BIOGEME static method), [1] make_setter() (biogeme.biogeme.BIOGEME static method), [1] mapping (biogeme.function_output.NamedFunctionOutput property) max_iterations (biogeme.biogeme.BIOGEME property), [1] max_number_parameters_to_report (biogeme.biogeme.BIOGEME property), [1] maximum_attempts (biogeme.biogeme.BIOGEME property), [1] maximum_number_catalog_expressions (biogeme.biogeme.BIOGEME property), [1] maximum_number_parameters (biogeme.biogeme.BIOGEME property), [1] Mdcev (class in biogeme.mdcev.mdcev) mdcev_count() (biogeme.database.Database method), [1] mdcev_row_split() (biogeme.database.Database method), [1] MdcevConfiguration (class in biogeme.mdcev.mdcev) message (biogeme.tools.likelihood_ratio.LRTuple attribute) mev() (in module biogeme.models.mev) (in module biogeme.models.models_orig) mev_endogenous_sampling() (in module biogeme.models.mev) mev_endogenousSampling() (in module biogeme.models.mev) (in module biogeme.models.models_orig) mev_partition (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) mev_sample_sizes (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) Minus (class in biogeme.expressions.binary_expressions), [1] missing_data (biogeme.biogeme.BIOGEME property), [1] missingData (biogeme.expressions.base_expressions.Expression attribute), [1] mixedloglikelihood() (in module biogeme.loglikelihood) MLHS_anti() (in module biogeme.native_draws) modelName (biogeme.biogeme.BIOGEME attribute), [1] (biogeme.results.RawResults attribute) ModelNames (class in biogeme.tools.unique_ids) modify_controller() (biogeme.controller.Controller method) modify_random_controllers() (biogeme.controller.CentralController method) module biogeme.assisted biogeme.biogeme, [1] biogeme.biogeme_logging biogeme.catalog biogeme.check_parameters biogeme.cnl biogeme.configuration biogeme.controller biogeme.data.mdcev_data biogeme.data.optima biogeme.data.swissmetro biogeme.database, [1] biogeme.default_parameters biogeme.deprecated biogeme.dict_of_formulas biogeme.distributions biogeme.draws biogeme.exceptions biogeme.expressions.base_expressions, [1] biogeme.expressions.beta_parameters, [1] biogeme.expressions.binary_expressions, [1] biogeme.expressions.calculator, [1] biogeme.expressions.catalog_iterator, [1] biogeme.expressions.comparison_expressions, [1] biogeme.expressions.convert, [1] biogeme.expressions.elementary_expressions, [1] biogeme.expressions.elementary_types, [1] biogeme.expressions.idmanager, [1] biogeme.expressions.logit_expressions, [1] biogeme.expressions.multiple_expressions, [1] biogeme.expressions.named_expression, [1] biogeme.expressions.nary_expressions, [1] biogeme.expressions.numeric_expressions, [1] biogeme.expressions.numeric_tools biogeme.expressions.unary_expressions, [1] biogeme.filenames biogeme.function_output biogeme.loglikelihood biogeme.lsh biogeme.mdcev.gamma_profile biogeme.mdcev.generalized biogeme.mdcev.mdcev biogeme.mdcev.non_monotonic biogeme.mdcev.translated biogeme.messaging biogeme.models.boxcox biogeme.models.cnl biogeme.models.logit biogeme.models.mev biogeme.models.models_orig biogeme.models.nested biogeme.models.ordered biogeme.models.piecewise biogeme.multiobjectives biogeme.native_draws biogeme.negative_likelihood biogeme.nests biogeme.optimization biogeme.parameters biogeme.partition biogeme.results biogeme.sampling_of_alternatives.choice_set_generation biogeme.sampling_of_alternatives.generate_model biogeme.sampling_of_alternatives.sampling_context biogeme.sampling_of_alternatives.sampling_of_alternatives biogeme.segmentation biogeme.singleton biogeme.specification biogeme.tools.checks biogeme.tools.database biogeme.tools.derivatives biogeme.tools.files biogeme.tools.likelihood_ratio biogeme.tools.primes biogeme.tools.time biogeme.tools.unique_ids biogeme.validity biogeme.version

monte_carlo (biogeme.biogeme.BIOGEME attribute), [1] (biogeme.results.RawResults attribute) MonteCarlo (class in biogeme.expressions.unary_expressions), [1] MultipleExpression (class in biogeme.expressions.multiple_expressions), [1]

N

name (biogeme.database.Database attribute), [1] (biogeme.default_parameters.ParameterTuple attribute) (biogeme.expressions.elementary_expressions.Elementary attribute), [1] (biogeme.expressions.multiple_expressions.NamedExpression attribute), [1] (biogeme.nests.OneNestForCrossNestedLogit attribute) (biogeme.nests.OneNestForNestedLogit attribute) (biogeme.parameters.NameSectionTuple attribute) (biogeme.results.Beta attribute) (biogeme.sampling_of_alternatives.sampling_context.CrossVariableTuple attribute) named_expression() (in module biogeme.expressions.named_expression), [1] NamedBiogemeDisaggregateFunctionOutput (class in biogeme.function_output) NamedBiogemeFunctionOutput (class in biogeme.function_output) NamedExpression (class in biogeme.expressions.multiple_expressions), [1] NamedFunctionOutput (class in biogeme.function_output) names (biogeme.expressions.idmanager.ElementsTuple attribute), [1] NameSectionTuple (class in biogeme.parameters) NegativeLikelihood (class in biogeme.negative_likelihood) nest_param (biogeme.nests.OneNestForCrossNestedLogit attribute) (biogeme.nests.OneNestForNestedLogit attribute) nested() (in module biogeme.models.models_orig) (in module biogeme.models.nested) nested_mev_mu() (in module biogeme.models.nested) nestedMevMu() (in module biogeme.models.models_orig) (in module biogeme.models.nested) Nests (class in biogeme.nests) NestsForCrossNestedLogit (class in biogeme.nests) NestsForNestedLogit (class in biogeme.nests) new (biogeme.biogeme.OldNewParamTuple attribute), [1] newton_linesearch_for_biogeme() (in module biogeme.optimization) newton_trust_region_for_biogeme() (in module biogeme.optimization) NonMonotonic (class in biogeme.mdcev.non_monotonic)

normal_antithetic() (in module biogeme.native_draws) normal_halton2() (in module biogeme.native_draws) normal_halton3() (in module biogeme.native_draws) normal_halton5() (in module biogeme.native_draws) normal_MLHS() (in module biogeme.native_draws) normal_MLHS_anti() (in module biogeme.native_draws) normalpdf() (in module biogeme.distributions) NotEqual (class in biogeme.expressions.comparison_expressions), [1] NotImplementedError nparam (biogeme.results.RawResults attribute) nullLogLike (biogeme.biogeme.BIOGEME attribute), [1] (biogeme.results.RawResults attribute) num_runs (biogeme.tools.time.Timing property) number_of_alternatives (biogeme.mdcev.mdcev.Mdcev property) number_of_configurations() (biogeme.controller.CentralController method) number_of_draws (biogeme.biogeme.BIOGEME property), [1] (biogeme.database.Database attribute), [1] number_of_free_parameters() (biogeme.results.bioResults method) number_of_multiple_expressions() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.elementary_expressions.Elementary method), [1] number_of_neighbors (biogeme.biogeme.BIOGEME property), [1] number_of_segments() (biogeme.partition.Partition method) number_of_threads (biogeme.biogeme.BIOGEME property), [1] number_unknown_parameters() (biogeme.biogeme.BIOGEME method), [1] numberOfDraws (biogeme.biogeme.BIOGEME property), [1] (biogeme.expressions.base_expressions.Expression attribute), [1] (biogeme.results.RawResults attribute) numberOfFreeParameters() (biogeme.results.bioResults method) numberOfObservations (biogeme.results.RawResults attribute) numberOfThreads (biogeme.biogeme.BIOGEME property), [1] (biogeme.results.RawResults attribute) Numeric (class in biogeme.expressions.numeric_expressions), [1]

O

old (biogeme.biogeme.OldNewParamTuple attribute), [1] OldNewParamTuple (class in biogeme.biogeme), [1] OneNestForCrossNestedLogit (class in biogeme.nests) OneNestForNestedLogit (class in biogeme.nests) OneSegmentation (class in biogeme.segmentation) only_robust_stats (biogeme.biogeme.BIOGEME property), [1] optimal_consumption() (biogeme.mdcev.mdcev.Mdcev method) optimal_consumption_one_alternative() (biogeme.mdcev.gamma_profile.GammaProfile method) (biogeme.mdcev.generalized.Generalized method) (biogeme.mdcev.mdcev.Mdcev method) (biogeme.mdcev.non_monotonic.NonMonotonic method) (biogeme.mdcev.translated.Translated method)

optimization_algorithm (biogeme.biogeme.BIOGEME property), [1] optimizationMessages (biogeme.biogeme.BIOGEME attribute), [1] (biogeme.results.RawResults attribute) optimize() (biogeme.biogeme.BIOGEME method), [1] Or (class in biogeme.expressions.binary_expressions), [1] ordered_likelihood() (in module biogeme.models.models_orig) (in module biogeme.models.ordered) ordered_logit() (in module biogeme.models.models_orig) (in module biogeme.models.ordered) ordered_probit() (in module biogeme.models.models_orig) (in module biogeme.models.ordered) outside_good_index (biogeme.mdcev.mdcev.Mdcev property)

P

panel() (biogeme.database.Database method), [1] panelColumn (biogeme.database.Database attribute), [1] PanelLikelihoodTrajectory (class in biogeme.expressions.unary_expressions), [1] parameter_file (biogeme.biogeme.BIOGEME attribute) parameter_names (biogeme.parameters.Parameters property) Parameters (class in biogeme.parameters) parameters_in_section() (biogeme.parameters.Parameters method) ParameterTuple (class in biogeme.default_parameters) pareto (biogeme.specification.Specification attribute) pareto_optimal() (in module biogeme.results) ParetoPostProcessing (class in biogeme.assisted) parse_boolean() (in module biogeme.parameters) Partition (class in biogeme.partition) pickleFileName (biogeme.results.RawResults attribute) piecewise_as_variable() (in module biogeme.models.models_orig) (in module biogeme.models.piecewise) piecewise_formula() (in module biogeme.models.piecewise) piecewise_function() (in module biogeme.models.piecewise) piecewise_variables() (in module biogeme.models.piecewise)

piecewiseFormula() (in module biogeme.models.models_orig) (in module biogeme.models.piecewise) piecewiseFunction() (in module biogeme.models.models_orig) (in module biogeme.models.piecewise) piecewiseVariables() (in module biogeme.models.models_orig) (in module biogeme.models.piecewise) plot() (biogeme.assisted.ParetoPostProcessing method) Plus (class in biogeme.expressions.binary_expressions), [1] Power (class in biogeme.expressions.binary_expressions), [1] PowerConstant (class in biogeme.expressions.unary_expressions), [1] prepare() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.idmanager.IdManager method), [1] prepare_operators() (biogeme.controller.CentralController method) price_is_none (biogeme.mdcev.mdcev.MdcevConfiguration attribute) print_general_statistics() (biogeme.results.bioResults method) printGeneralStatistics() (biogeme.results.bioResults method) process_row() (biogeme.sampling_of_alternatives.choice_set_generation.ChoiceSetsGeneration method) properties_initialized (biogeme.biogeme.BIOGEME attribute), [1] pValue (biogeme.results.Beta attribute)

Q

quick_estimate() (biogeme.biogeme.BIOGEME method), [1]

quickEstimate() (biogeme.biogeme.BIOGEME method), [1]

R

RANDOM_VARIABLE (biogeme.expressions.elementary_types.TypeOfElementaryExpression attribute), [1] RandomNumberGeneratorTuple (class in biogeme.native_draws) RandomVariable (class in biogeme.expressions.elementary_expressions), [1] RawResults (class in biogeme.results) read_data() (in module biogeme.data.mdcev_data) (in module biogeme.data.optima) (in module biogeme.data.swissmetro) read_file() (biogeme.parameters.Parameters method) reason (biogeme.validity.Validity attribute) recycled_estimation() (biogeme.biogeme.BIOGEME method), [1] reestimate() (biogeme.assisted.ParetoPostProcessing method) remove() (biogeme.database.Database method), [1] rename_elementary() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.elementary_expressions.Elementary method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1]

report_array() (biogeme.biogeme.BIOGEME method), [1] reporting() (biogeme.sampling_of_alternatives.sampling_context.SamplingContext method) requires_draws() (biogeme.expressions.base_expressions.Expression method), [1] requiresDraws() (biogeme.expressions.base_expressions.Expression method), [1] reset_expression_selection() (biogeme.expressions.base_expressions.Expression method), [1] reset_id_manager() (biogeme.biogeme.BIOGEME method), [1] reset_selection() (biogeme.controller.Controller method) robust_pValue (biogeme.results.Beta attribute) robust_stdErr (biogeme.results.Beta attribute) robust_tTest (biogeme.results.Beta attribute) run() (biogeme.assisted.AssistedSpecification method)

S

sample_alternatives() (biogeme.sampling_of_alternatives.sampling_of_alternatives.SamplingOfAlternatives method) sample_and_merge() (biogeme.sampling_of_alternatives.choice_set_generation.ChoiceSetsGeneration method) sample_individual_map_with_replacement() (biogeme.database.Database method), [1] sample_mev_alternatives() (biogeme.sampling_of_alternatives.sampling_of_alternatives.SamplingOfAlternatives method) sample_size (biogeme.sampling_of_alternatives.sampling_context.StratumTuple attribute) sample_sizes (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) sample_with_replacement() (biogeme.database.Database method), [1] sampleIndividualMapWithReplacement() (biogeme.database.Database method), [1] sampleSize (biogeme.results.RawResults attribute) sampleWithReplacement() (biogeme.database.Database method), [1] SamplingContext (class in biogeme.sampling_of_alternatives.sampling_context) SamplingOfAlternatives (class in biogeme.sampling_of_alternatives.sampling_of_alternatives) save_iterations (biogeme.biogeme.BIOGEME property), [1] scale_column() (biogeme.database.Database method), [1] scaleColumn() (biogeme.database.Database method), [1] scipy() (in module biogeme.optimization) second_derivatives (biogeme.biogeme.BIOGEME property), [1] section (biogeme.biogeme.OldNewParamTuple attribute), [1] (biogeme.default_parameters.ParameterTuple attribute) (biogeme.parameters.NameSectionTuple attribute) sections (biogeme.parameters.Parameters property) sections_from_name() (biogeme.parameters.Parameters method) seed (biogeme.biogeme.BIOGEME property), [1] segment_parameter() (in module biogeme.segmentation) Segmentation (class in biogeme.segmentation) segmentation_catalogs() (in module biogeme.catalog) segmented_beta() (biogeme.segmentation.Segmentation method) (in module biogeme.segmentation) segmented_code() (biogeme.segmentation.Segmentation method) SegmentedParameters (class in biogeme.catalog) select_expression() (biogeme.expressions.base_expressions.Expression method), [1] selected() (biogeme.catalog.Catalog method) (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] selected_expression() (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] selected_name() (biogeme.catalog.Catalog method) (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] SelectedExpressionsIterator (class in biogeme.expressions.catalog_iterator), [1] selection (biogeme.configuration.SelectionTuple attribute) selections (biogeme.configuration.Configuration property) SelectionTuple (class in biogeme.configuration) set_bootstrap_std_err() (biogeme.results.Beta method) set_central_controller() (biogeme.expressions.base_expressions.Expression method), [1] set_configuration() (biogeme.controller.CentralController method) set_configuration_from_id() (biogeme.controller.CentralController method) set_controller() (biogeme.controller.CentralController method) set_data() (biogeme.expressions.idmanager.IdManager method), [1] set_data_map() (biogeme.expressions.idmanager.IdManager method), [1] set_id_manager() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.beta_parameters.Beta method), [1] (biogeme.expressions.elementary_expressions.bioDraws method), [1] (biogeme.expressions.elementary_expressions.RandomVariable method), [1] (biogeme.expressions.elementary_expressions.Variable method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1]

set_index() (biogeme.controller.Controller method) set_name() (biogeme.controller.Controller method) set_of_configurations() (biogeme.expressions.base_expressions.Expression method), [1] set_of_controllers() (biogeme.configuration.Configuration method) set_of_elementary_expression() (biogeme.expressions.base_expressions.Expression method), [1] (biogeme.expressions.multiple_expressions.MultipleExpression method), [1] set_of_multiple_expressions() (biogeme.expressions.base_expressions.Expression method), [1] set_random_init_values() (biogeme.biogeme.BIOGEME method), [1] set_random_number_generators() (biogeme.database.Database method), [1] set_robust_std_err() (biogeme.results.Beta method) set_std_err() (biogeme.results.Beta method) set_value() (biogeme.parameters.Parameters method) setData() (biogeme.expressions.idmanager.IdManager method), [1] setDataMap() (biogeme.expressions.idmanager.IdManager method), [1] setDebug() (biogeme.messaging.bioMessage method) setDetailed() (biogeme.messaging.bioMessage method) setGeneral() (biogeme.messaging.bioMessage method) setIdManager() (biogeme.expressions.base_expressions.Expression method), [1] setRandomInitValues() (biogeme.biogeme.BIOGEME method), [1] setRandomNumberGenerators() (biogeme.database.Database method), [1] setSilent() (biogeme.messaging.bioMessage method) setWarning() (biogeme.messaging.bioMessage method) short_names (biogeme.biogeme.BIOGEME attribute) short_summary() (biogeme.results.bioResults method) shortSummary() (biogeme.results.bioResults method) simple_bounds_newton_algorithm_for_biogeme() (in module biogeme.optimization) simulate() (biogeme.biogeme.BIOGEME method), [1] sin (class in biogeme.expressions.unary_expressions), [1] Singleton (class in biogeme.singleton) SmartOutputProxy (class in biogeme.function_output) sorting_utility_one_alternative() (biogeme.mdcev.generalized.Generalized method) Specification (class in biogeme.specification) split() (biogeme.database.Database method), [1] statistic (biogeme.tools.likelihood_ratio.LRTuple attribute) status (biogeme.validity.Validity attribute) stdErr (biogeme.results.Beta attribute) steptol (biogeme.biogeme.BIOGEME property), [1] StratumTuple (class in biogeme.sampling_of_alternatives.sampling_context) subset (biogeme.sampling_of_alternatives.sampling_context.StratumTuple attribute) suggest_scaling() (biogeme.database.Database method), [1] suggestScaling() (biogeme.database.Database method), [1] sum_of_utilities() (biogeme.mdcev.mdcev.Mdcev method) symm_halton2() (in module biogeme.native_draws) symm_halton3() (in module biogeme.native_draws) symm_halton5() (in module biogeme.native_draws) symm_MLHS() (in module biogeme.native_draws) symm_MLHS_anti() (in module biogeme.native_draws) symm_uniform() (in module biogeme.native_draws) symm_uniform_antithetic() (in module biogeme.native_draws)

T

TemporaryFile (class in biogeme.tools.files) term (biogeme.expressions.nary_expressions.ConditionalTermTuple attribute), [1] the_dimension (biogeme.negative_likelihood.NegativeLikelihood attribute) the_partition (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) theDraws (biogeme.database.Database attribute), [1] threshold (biogeme.tools.likelihood_ratio.LRTuple attribute) time_function() (biogeme.tools.time.Timing method) Times (class in biogeme.expressions.binary_expressions), [1] Timing (class in biogeme.tools.time) tolerance (biogeme.biogeme.BIOGEME property), [1] transformed_utility() (biogeme.mdcev.gamma_profile.GammaProfile method) (biogeme.mdcev.generalized.Generalized method) (biogeme.mdcev.mdcev.Mdcev method) (biogeme.mdcev.non_monotonic.NonMonotonic method) (biogeme.mdcev.translated.Translated method)

Translated (class in biogeme.mdcev.translated) triangularpdf() (in module biogeme.distributions) tTest (biogeme.results.Beta attribute) two_controllers() (biogeme.controller.CentralController method) type (biogeme.default_parameters.ParameterTuple attribute) TypeOfElementaryExpression (class in biogeme.expressions.elementary_types), [1] typesOfDraws (biogeme.database.Database attribute), [1] (biogeme.results.RawResults attribute)

U

ub (biogeme.results.Beta attribute) UnaryMinus (class in biogeme.expressions.unary_expressions), [1] UnaryOperator (class in biogeme.expressions.unary_expressions), [1] uniform_antithetic() (in module biogeme.native_draws) uniformpdf() (in module biogeme.distributions) unique_entry() (biogeme.function_output.BiogemeDisaggregateFunctionOutput method) unique_product() (in module biogeme.tools.unique_ids) user_defined_validity_check (biogeme.specification.Specification attribute) user_notes (biogeme.biogeme.BIOGEME attribute), [1] userNotes (biogeme.results.RawResults attribute) userRandomNumberGenerators (biogeme.database.Database attribute), [1]

utility_expression_one_alternative() (biogeme.mdcev.gamma_profile.GammaProfile method) (biogeme.mdcev.generalized.Generalized method) (biogeme.mdcev.mdcev.Mdcev method) (biogeme.mdcev.non_monotonic.NonMonotonic method) (biogeme.mdcev.translated.Translated method) utility_function (biogeme.sampling_of_alternatives.sampling_context.SamplingContext attribute) utility_one_alternative() (biogeme.mdcev.gamma_profile.GammaProfile method) (biogeme.mdcev.generalized.Generalized method) (biogeme.mdcev.mdcev.Mdcev method) (biogeme.mdcev.non_monotonic.NonMonotonic method) (biogeme.mdcev.translated.Translated method)

V

validate() (biogeme.biogeme.BIOGEME method), [1] validate_and_convert() (in module biogeme.expressions.convert), [1] validate_dict_types() (in module biogeme.tools.checks) validate_forecast() (biogeme.mdcev.mdcev.Mdcev method) validate_partition() (biogeme.partition.Partition method) validate_segments() (biogeme.partition.Partition method) validation (biogeme.database.EstimationValidation attribute), [1] validation() (biogeme.mdcev.mdcev.Mdcev method) validation_one_alternative() (biogeme.mdcev.mdcev.Mdcev method) validation_one_alternative_one_consumption() (biogeme.mdcev.mdcev.Mdcev method) Validity (class in biogeme.validity) value (biogeme.default_parameters.ParameterTuple attribute) (biogeme.expressions.numeric_expressions.Numeric attribute), [1] (biogeme.results.Beta attribute) (biogeme.results.GeneralStatistic attribute)

ValueOutOfRange values_from_database() (biogeme.database.Database method), [1] valuesFromDatabase() (biogeme.database.Database method), [1] VARIABLE (biogeme.expressions.elementary_types.TypeOfElementaryExpression attribute), [1] Variable (class in biogeme.expressions.elementary_expressions), [1] variables (biogeme.database.Database attribute), [1] (biogeme.expressions.nary_expressions.bioLinearUtility attribute), [1] variance_covariance_missing() (biogeme.results.bioResults method) verify_segmentation() (biogeme.database.Database method), [1] version (biogeme.biogeme.BIOGEME property), [1]

W

warm_up_runs (biogeme.tools.time.Timing property) weight (biogeme.biogeme.BIOGEME attribute), [1] weight_name (biogeme.biogeme.BIOGEME attribute), [1] weightSignatures (biogeme.biogeme.BIOGEME attribute), [1] write_f12() (biogeme.results.bioResults method) write_html() (biogeme.results.bioResults method)

write_latex() (biogeme.results.bioResults method) write_pickle() (biogeme.results.bioResults method) writeF12() (biogeme.results.bioResults method) writeHtml() (biogeme.results.bioResults method) writeLaTeX() (biogeme.results.bioResults method) writePickle() (biogeme.results.bioResults method)

X

x (biogeme.expressions.nary_expressions.LinearTermTuple attribute), [1]

Z

zero_one() (in module biogeme.check_parameters)